Drosophila melanogaster also known as fruit fly is a well studied organism in the field of genetics

96 Pages·2013·0.92 MB·English

i

This paper was prepared
under the direction of
Professor Craig Woodard
for eight credits.
ii

“As you set out for Ithaca
hope that your journey is a long one,
full of adventure, full of discovery.
Laistrygonians and Cyclops,
angry Poseidon-don't be afraid of them:
you'll never find things like that on your way
as long as you keep your thoughts raised high,
as long as a rare sensasion
touches your spirit and your body.
Laistrygonians and Cyclops,
wild Poseidon-you won't encounter them
unless you bring them along inside your soul,
unless your soul sets them up in front of you.

Hope that your journey is a long one.
May there be many summer mornings when,
with what pleasure, what joy,
you come into harbors you're seeing for the first time;
may you stop at Phoenician trading stations
to buy fine things,
mother of pearl and coral, amber and ebony,
sensual perfume of every kind-
as many sensual perfumes as you can;
and may you visit many Egyptian cities
to learn and learn again from those who know.

Keep Ithaka always in your mind.
Arriving there is what you're destined for.
But don't hurry the journey at all.
Better if it lasts for years,
so that you're old by the time you reach the island,
wealthy with all you've gained on the way,
not expecting Ithaca to make you rich.
Ithaca gave you the marvelous journey.
Without her you would have not set out.
She has nothing left to give you now.

And if you find her poor, Ithaca won't have fooled you.
Wise as you will have become, so full of experience,
you'll have understood by then what these Ithacas mean.”
(Ithaca, C.P. Cavafy)

~ To my family, friends and every other person in my life who made my
journey possible. It is because of their unconditional love and generosity
that I’ve been able to keep walking towards my destination. ~
iii

The Genetic Control of Fat Body Development
and Function in Drosophila melanogaster

By
Efthymia Papalexi

A Paper Presented to the
Faculty of Mount Holyoke College in
Partial Fulfillment of the Requirements for
the Degree of Bachelors of Arts with
Honor

Department of Biological Sciences
South Hadley, MA 01075
May 2013
iv

Acknowledgements
Throughout her life a good traveler will never forget two things: First she will
never forget the place she started off her journey and second she will never
forget all those people that made her journey possible.
Having said that, I would like to thank the department of Biological sciences,
Howard-Hughes medical institute, the office of academic deans and Mount
Holyoke College for giving me the opportunity to work on this project. My
acknowledgements also go to Jeff Knight and Sheila Browne for being my
thesis committee members and Marian Rice for helping me with fluorescent
microscopy. Your skillful guidance is greatly appreciated.
I would also like to thank Professor Craig Woodard for giving me the
opportunity to work at his laboratory. From the very first day I met him I
realized he is and will always be a great advisor/ advocate/friend/professor for
those who wish to learn. Craig, I will never forget how forgiving, generous,
patient and supportive you have been with me!
A Greek proverb says: “Show me your friends and I’ll tell who you are”. On
that note, I also would like to thank my true and only friends who never failed
to show the world how cool and crazy I am! Emmanuel Glinos and Sonia
Razaqyar you will always have a special place in my heart. Thanks for putting
up with my thoughts, frustrations and philosophical concerns.
Finally, I would like to acknowledge my greatest fans in life, my parents.
Μαμά, Μπαμπά σας ευχαριστώ πολύ για την στήριξη και την αγάπη που μου
δίνετε. Χωρίς τις ανευ όρων θυσίες σας δεν θα μπορούσα κυνηγήσω, πόσω
μάλλον δε να επιτύχω τους στόχους μου και γι’αυτό σας είμαι ευγνώμων. Σας
αγαπώ και σας σκέφτομαι συνέχεια...
v

Table of Contents
Page
Acknowledgements ............................................................................. iv
List of Figures....................................................................................... ix
List of Tables........................................................................................ xi
Abstract................................................................................................ xiii
Introduction..........................................................................................

A. Fat-Body Remodeling..........................................................
Summary............................................................................. 1
The Drosophila Life Cycle................................................. 3
Hormonal Regulation of Post-Embryonic Development.... 7
The Drosophila Nuclear Receptor βFTZ-F1...................... 10
Drosophila Matrix-Metalloproteinase 2 (MMP2) and Tissue
Inhibitor of Matrix- Metalloproteinases (TIMP) ............... 14
SF-1 Member of the Ftz-F1 Family.................................... 17
Hypothesis and Future Goals.............................................. 18
B. Larval Fat Body and Insulin Signaling................................
Summary........................................ .................................... 19
The Drosophila Larval Fat Body: Nutrient Storage........... 21
Insulin/ Insulin-Like Growth Factor Signaling Pathway.... 22
The Phosphatidylinositol-3 Signaling Pathway.................. 23
The Target of Rapamycin (TOR) Signaling Pathway.......... 24
Insulin Signaling Regulation by 20-Hydroxyecdysone
vi

(20E)..................................................................................... 26
Mammalian Insulin-Like Growth Factor Binding Proteins and
Matrix-Metalloproteinases............................................. .... 28
Hypothesis and Future Goals.............................................. 32
Materials and Methods ......................................................................
Fruit Fly Care...................................................................... 34
Drosophila Stocks and Crosses .......................................... 34
UAS/Gal4 System............................................................... 35
Staging 3rd Instar Larvae..................................................... 37
Starvation Experiments....................................................... 37
Fat Body Dissection and RNA Isolation............................ 37
DNA-Free/DNAse Treatment: Removal of Contaminating
Genomic DNA.................................................................... 38
First Strand cDNA Synthesis.............................................. 38
RNA/DNA Quantification.................................................. 39
Reverse Transcriptase Polymerase Chain Reaction and Gel
Electrophoresis................................................................... 39
Quantitative PCR............................................................... 42
Standard Curves................................................................. 43
Experimental qPCR........................................................... 44
Fluorescent Microscopy.................................................... 45
Statistical Analysis............................................................ 46
Results................................................................................................
A. Transgenic Fly Experiments on SF-1
vii

Presence of βftz-f1 Transcripts ........................................ 47
Presence of SF-1 Transcripts .......................................... 49
Premature Fat-Body Remodeling.................................... 50
B. The Effects of Starvation on Insulin Signaling and MMP2
Expression in Drosophila Melanogaster Larvae ...............
Insulin Signaling Inhibition in Starved Larvae................ 52
Presence of MMP2 transcripts in Fed w1118 3rd Instar
Larvae............................................................................... 58
Presence of MMP2 transcripts in Starved w1118 3rd Instar
Larvae............................................................................. 60
Experimental Quantitative PCR Analysis of MMP2 Gene
Expression in Fed and Starved Larvae...........................
I. Standard Curves and Primer Efficiency....... 62
II. Experimental qPCR Analysis....................... 64
Discussion........................................................................................
A. Premature SF-1 Expression does not Induce Premature Fat-Body
Remodeling .................................................................. 66
B. MMP2: A Potential Insulin Signaling Regulator........... 68
Insulin Signaling Regulation in Starved Larvae............ 68
Insulin Signaling Downregulation by MMP2 during
Starvation....................................................................... 70
MMP2 does not Act Independently to Regulate Insulin
Signaling........................................................................ 70
Future Studies................................................................ 71
viii

Appendix ....................................................................................... 73
References...................................................................................... 77
ix

List of Figures
- Figure 1. The Drosophila melanogaster Life Cycle................ 4
- Figure 2. Morphological Differences between Instars as they Result
from Molting. ........................................................................... 5
- Figure 3. Changes in Ecdysone Hormonal Signaling During
Metamorphosis. ....................................................................... 9
- Figure 4. Three ftz-f1 mRNAs Differ in Size and Structure. 11
- Figure 5. Fat-Body Remodeling Stages. ................................ 13
- Figure 6. Gene Involvement in Different Fat-Body
Remodeling Stages ................................................................. 15
- Figure 7. Drosophila Insulin-like Signaling: Activation of PlK3
Singaling and TOR Signaling Pathways. ............................... 25
- Figure 8. Proposed Model for Insulin Signaling Regulation During
Larval Development. .............................................................. 31
- Figure 9. UAS/Gal4 System. ................................................. 36
- Figure 10. βftz-f1 Primer-Specific RT-PCR Gel ................... 48
- Figure 11. SF-1 Primer-Specific RT-PCR Gel ...................... 49
- Figure 12. Premature Fat-Body Remodeling in Late 3rd
Instar Larvae. .......................................................................... 51
- Figure 13. Insulin Signaling Detection in 2nd Instar Larvae Using the
GPH System. ........................................................................... 54
x

- Figure 14. Partial Disruption of Insulin Singaling in 2nd Instar Starved
Larvae. ..................................................................................... 55
- Figure 15. Insulin Signaling Detection in 3rd Instar Larvae (Feeding
Stage) Using the GPH System. .................................................. 56
- Figure 16. Insulin Signaling Detection in 3rd Instar Larvae (Wandering
Stage) Using the GPH System….............................................. 57
- Figure 17. Actin5c/MMP2 Primer-Specific RT-PCR Gel of Fed 3rd Instar
Larvae. ....................................................................................... 59
- Figure 18. Actin5c/MMP2 Primer-Specific RT-PCR Gel of Starved 3rd
Instar Larvae. ............................................................................ 61
- Figure 19. Actin5c Standard Curve. ........................................ 62
- Figure 20. MMP2 Standard Curve. .......................................... 63
- Figure 21. Quantitative PCR Analysis of MMP2 Expression in
Drosophila melanogaster Developmental Stages. .................. 65